CDS
| Accession Number | TCMCG057C48658 |
| gbkey | CDS |
| Protein Id | XP_018452560.1 |
| Location | complement(join(11302067..11302141,11302217..11302346,11302409..11302601,11302685..11302756,11302841..11302913,11302993..11303097,11303340..11303462,11303603..11303679,11303795..11303839,11303932..11304170,11304248..11304294)) |
| Gene | LOC108823778 |
| GeneID | 108823778 |
| Organism | Raphanus sativus |
Protein
| Length | 392aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018597058.1 |
| Definition | PREDICTED: spermine synthase-like isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | H |
| Description | Belongs to the spermidine spermine synthase family |
| KEGG_TC | - |
| KEGG_Module |
M00034
[VIEW IN KEGG] M00133 [VIEW IN KEGG] |
| KEGG_Reaction |
R01920
[VIEW IN KEGG] R02869 [VIEW IN KEGG] R08359 [VIEW IN KEGG] |
| KEGG_rclass |
RC00021
[VIEW IN KEGG] RC00053 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00797
[VIEW IN KEGG] |
| EC |
2.5.1.16
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00270
[VIEW IN KEGG] ko00330 [VIEW IN KEGG] ko00410 [VIEW IN KEGG] ko00480 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00270 [VIEW IN KEGG] map00330 [VIEW IN KEGG] map00410 [VIEW IN KEGG] map00480 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGATTCGGACCAACCCTTGTCTCCAAAGTCTTCAACTTTCCAGTCTTATACAGAGAGGCTGGAGCTGGGGAAGAAGAAAAGGATTGTTTATGGAGGGAGAAGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGGATGGGAATGCGAGTAATGGGAATGGTCTGGAGAAGACTGTTGTACCTTCTTGTTGCCTCAAGGCTATCTCTTGCTTACCTGAGCAAGATGCTAAGTGCCACTCCACTGTTGTCTCTGGATGGTTCTCCGAACCTCCTCACCCTCGCTCTGGGAAAAGAGGCAAAACAGTGTATTTTAACAACCCTATGTGGCCAGGAGAAGCACACTCACTGAAAGTTGAGAAAGTTCTATTCAAAGACAAGTCAGATTATCAGGAAGTCCTGGTGTTTGAGTCAGCTACGTATGGGAAAGTGCTTGTTCTAGATGGTATTCTACAGCTGACTGAAAAAGATGAATTTGCATATCAGGAGATGATAGCCCATCTACCTTTATGCTCTACACCTTCACCTAGAAATGTTCTGGTTGTTGGTGGAGGTGATGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTATTGACATTTGTGAGATAGACAAGATGGTCATAGATGTGTCTAAGAAGTTCTTCCCCGAGTTAGCGGTTGGATTTGAGGATCCTCGTGTTCATCTTCACATTGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGAAGGGAAGTATGATGCCATTATTGTGGATTCTTCAGACCCTGTTGGTCCTGCTCAGGCGCTTGTTGAGAAGCCTTTCTTTGAGACTATAGCTAGAGCGTTGAAGCCTGGAGGAGTTCTTTGCAACATGGCGGAAAGTATGTGGCTCCACACTCATCTCATTGAAGACATGATCTCGATTTGCCGCCAAACATTCAAAAACGTTCAATATGCGTGGAGCAGCGTCCCAACATACCCAAGCGGCGTGATTGGTTTTATCTTGTGCTCTACGGGCGGTCCCGCTGTTGATTTCAAGAACCCTATTAACCCTATTGAGAAACTAGAAGGTGCCATGACCTATAAGCGAGAAATGAAGTTTTACAACTCGGATATGCACAGAGCAGCTTTCGCTTTGCCTACTTTCCTTAGAAGAGAAGTGGCTTCACTTCTGTCTTCTTCTTCTTGA |
| Protein: MIRTNPCLQSLQLSSLIQRGWSWGRRKGLFMEGEGVKGLGCQKTMDGNASNGNGLEKTVVPSCCLKAISCLPEQDAKCHSTVVSGWFSEPPHPRSGKRGKTVYFNNPMWPGEAHSLKVEKVLFKDKSDYQEVLVFESATYGKVLVLDGILQLTEKDEFAYQEMIAHLPLCSTPSPRNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFEDPRVHLHIGDAVEFLRKSPEGKYDAIIVDSSDPVGPAQALVEKPFFETIARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFKNVQYAWSSVPTYPSGVIGFILCSTGGPAVDFKNPINPIEKLEGAMTYKREMKFYNSDMHRAAFALPTFLRREVASLLSSSS |